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STARFISH.DNA
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1991-11-27
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9KB
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255 lines
LOCUS PIOACT 5070 bp ds-DNA INV 15-DEC-1989
DEFINITION Starfish (P.ochraceus) muscle actin gene, complete cds.
ACCESSION M26500
KEYWORDS actin.
SOURCE Starfish (P.ochraceus) DNA, clone-lambda PoA160.
ORGANISM Pisaster ochraceus
Eukaryota; Animalia; Eumetazoa; Echinodermata; Asterozoa;
Stelleroidea; Asteroidea; Forcipulata; Asteriidae.
REFERENCE 1 (bases 1 to 5070)
AUTHORS Kowbel,D.J. and Smith,M.J.
TITLE The genomic nucleotide sequences of two differentially expressed
actin-coding genes from the sea star Pisaster ochraceus
JOURNAL Gene 77, 297-308 (1989)
STANDARD simple staff_entry
COMMENT Draft entry and computer readable copy of sequence [Gene 77,
297-308 (1989)] kindly
provided by D.J.Kowbel, 25-JUL-1989.
FEATURES Location/Qualifiers
CDS join(866. .991,1689. .1928,2414. .2498,2849. .3010,3284.
.3475,
4064. .4389)
/note="muscle actin"
/codon_start=866
exon 866. .991
/note="muscle actin, exon 1"
intron 992. .1688
/note="M actin intron A"
exon 1689. .1928
/note="muscle actin, exon 2"
intron 1929. .2413
/note="M actin intron B"
exon 2414. .2498
/note="muscle actin, exon 3"
intron 2499. .2848
/note="M actin intron C"
exon 2849. .3010
/note="muscle actin, exon 4"
intron 3011. .3283
/note="M actin intron D"
exon 3284. .3475
/note="muscle actin, exon 5"
intron 3476. .4063
/note="M actin intron E"
exon 4064. .4389
/note="muscle actin, exon 6"
BASE COUNT 1471 a 1070 c 1028 g 1500 t 1 others
ORIGIN 1 bp upstream of Hind III site.
M26500 Length: 5070 November 27, 1991 01:25 Type: N Check: 6675 ..
1 AAGCTTGATG TTTTCATTTG TGCGCCATGT TGTCATTTTC ACTTTTCAGA
51 TTTTACAGTC AGACCAAATA CTGTCAGTGC TCTTCAGTTA TTTCTGCAGT
101 ATTTTCAGAG GCCATTTTAA AACAGAGAAA GTGTGTGTCC CATAAGCATG
151 CCCATCTGTA TAATGAGCAT TCCTATAATG ACCGCCTAAT TTGGAAATCC
201 AGAAGCTGAA ACCTTCAACC AATCGCGAGA ACTGTTATGT CGTTAAGCCA
251 ACGGACCAAT TAGAGCGCTC GATCTTCTGG TATTTTGACC GCATTCGTCT
301 CCACTCCAAA CAAGGTCATG GTGAATACAT GCGCTGATGT GGAATGTAGC
351 CGACTATGCC GAAGTGTGTG TTACACATTA CACTTATTAT TTTTATGGGT
401 TAGACATGCA AAGTTGATAA AGACCTAAAA CGTGTGAGAA AAAAAAAATG
451 GGGATCTAAC TGGGGTTTAT TTTCGGTGGT GCTAATACAA TCGCAGGAAA
501 TGCCGCTTCG TGCTGTTATG TTGTTGAGAC AGTTAGTAAT GTAAAAAGGA
551 TTTGGATGTC AAACACAGAT AAGCATTTTA TTTGACACAA TTTCGCAGTT
601 TGTATTTATT TATTTGTTCA ATAATTTTTT TTTCAGAATT GGATTTGAAC
651 TCTTTCCATC AATTTGACAT TTAGGGAGAG AGATAAGAAT TTAAACGGAC
701 AGGAAAGTTA TCGTGCAGCT CTCAGCTTTT CCAGGAATGA ATTTCGCCTC
751 TCGATCGCCT CAATCTAAAC AATTTTGTAT ACTATCTCAA GTTGGTGTAT
801 TTTGTTTACT TTTACCACTT TTCCAGGATT TGTTTGACGT GAAGGGAACT
851 AGGTAATCAT TCACCATGTG TGACGAGGAT GTTGCCGCTT TGGTCGTAGA
901 CAATGGCTCC GGTATGTGCA AGGCCGGATT CGCCGGAGAC GATGCCCCAA
951 GGGCTGTGTT CCCATCCATT GTAGGGAGAC CACGTCACCA GGTTTGTGAA
1001 ATTTGTCTAC TGTTCCCATG CATTTAAGGG AGAAACGTCA ACATATTCCT
1051 ATTAATTGCC ACCTCAACGA AAGTCAAACA AAAAGACTGT AACTCACCAT
1101 CATGCATGCA CTCTTCTCTG TGTTTTCCCT GGCAACAAGA CTGGAAGAAA
1151 CTGTGAAACA TGTGACATTG AGTATCAAAG CAACGTGACA TTTTCGTCAT
1201 CAAATTTCCC ATTTGGTCAG TCTACACTAC CTGCAACTCT TTGCACAACA
1251 TGGAGCATGA TTACAAAAAA TGCCAATTCA ACAATGTACT GGGTTGAGGG
1301 TGAACCAACC GTTTCATAAG ACAGCCCCCA TTTGCCATGC CAGATGTGTG
1351 GCAGAGGGAG TCTCCCAACA AAAATGTTCA TAGGCCTACA CTGTACCACA
1401 ATCTTGTAAG GAAGTTCAGC CGAAATCATC TAAAGGATTC CTGAGATTCC
1451 CAGAACACAA TGGGGGCGGG GGGGGGGTAG ACCATAACTC ACTGAGCACC
1501 AAATGTCGCA CCGGATTGTA AGATGTCTTA ATCCGGATGG CCGGGTTAAT
1551 TGTTCAAAAT AACAAGAACA CAGGAGCAAG ACTATTTTGA ATAGTACTAC
1601 AAAACCTCAA ACCAAACCAA GCCAAACAAA TACTTCTTCA TGAAACTTTG
1651 ATTCATGACT AGAATTTGAT TTGTCTTTAT CCATATAGGG TGTGATGGTA
1701 GGTATGGGTC AGAAGGACAG CTACGTAGGA GACGAAGCCC AGAGCAAGAG
1751 AGGTATCCTG ACTCTCAAGT ACCCCATTGA GCACGGTATC GTCACTAACT
1801 GGGACGATAT GGAGAAGATC TGGCATCACA CCTTCTACAA TGAACTCCGT
1851 GTGGCACCAG AGGAGCACCC CGTGCTCTTG ACTGAAGCCC CCCTCAACCC
1901 CAAAGCCAAC AGAGAAAAGA TGACACAGGT ATGATAATGC TGGTTTGTTT
1951 GTTTGTTTGT TTGTTGAGTC GTTGGGGTGT TGGGGTGTTT ATTTGTTTGT
2001 TTGTTTATTT GTTTTTTGGG GGGCGGTTGA TATAAGGAGG CATTCTTTGT
2051 CCTTTACACC TCAGTTTGAT TTTAATACAC TGACACGAGT TTGATACAAA
2101 ATGGCCGCAG CATGATTACG GCCCTTTGGC GATAACAGTT GGATCGAGCA
2151 GATGTTAAAG AACAGCTCTT ACAAAATTAT ACGTATTTTG TCAAGAATAT
2201 TGTTTGAAGA ATTGCATTTT ATTTCCACTC ACTATAAGAA GGGCATGTAT
2251 CCATTATGCC GTTGTAAATT CACTTTTTGT GGGGGATCAA GCGTGATCTC
2301 TCTTCTAAGA AAGTGAACAT TCAGAAGATC TTGTATTCTT TCACCTAAAC
2351 GCCACACAAA TCTTTTAGGA AATAAGATAA CAATCTGGTG TTATTATTGC
2401 TCTCTCCAAA CAGATCATGT TCGAGACCTT CAACTCCCCC GCCATGTACG
2451 TCGCCATCCA GGCTGTGCTC TCCCTCTACG CTTCCGGTCG TACCACCGGT
2501 AAATATTCTC TTCTACTTTT CTAAAGAAAA ATTAAAATAA ACAACAACTG
2551 AAAAAATGGT GTAACGTTTG TGCTTGATGG GGGGAAAAAA CCACACACAC
2601 AAATACACAC AGACGATCGT TACTCTCAAA GTTTCATTTC CATAAATTGG
2651 AGAAATTCTA GCTCCGAAGG CGACACTTCA TCGTTAGTTG GTTCGTTCGT
2701 ATTTTGAAAG TGCGTATAAA ACCAACTTAT AAACTATCTT CTTTTAAAAT
2751 GATCCTCTTG GTTCAATGCA GTTTGATTGA AATAATCTTC CTCGAAACAT
2801 TACAGTCATG CCAAGACTTT AAGTACATCT TAAAAATCTT CTCTGCAGGT
2851 ATTGTCTTCG ATACCGGCGA TGGTGTCTCC CACACCGTCC CAATCTACGA
2901 AGGTTACGCT CTCCCCCACG CCATCCTCCG TCTGGACTTG GCTGGTCGTG
2951 ACTTGACCGA CTACTTGATG AAGATCCTTA CCGAGCGTGG CTACTCTTTC
3001 ACAACCACGG GTAGGTTTGT CTGTTTGTTC GTAATGTACA CTTTTTATAA
3051 AAACAAACTT TTAGTGCAAC AAGTAGAAGT CGACGTGAAA AGTTAACGAG
3101 AAAGTCTTCC AAACTTGTCC CGTTCCTCTT CTGTTTTTAG TTGTTTATGT
3151 TGGATTGCCC CAATTAAATG GAAATTACAT TATGGCTTGT ATAAGTCTTC
3201 AATACACCTC ACCCATTCGT CTAGGCTTTT TGACAATTTC TGTACAAACA
3251 ATTGAAAACG CTCTCTTTAT TTTCCCCCTA AAGCCGAGCG TGAAATCGTG
3301 CGTGACATCA AGGAGAAACT TTGCTACACC GCCTTGGACT TCGAGCAGGA
3351 GATGCAGACC GCTTCATCCA GCTCCTCCTT GGAGAAGAGC TACGAGTTGC
3401 CCGACGGTCA GGTCATCACC ATCGGAAACG AGCGCTTCAG GTGCCCCGAG
3451 ACCCTCTTCC AGCCCGCTTT CATTGGTAAG AGAAGCTGCC CCCCCCCATG
3501 ATCCTTCTAT TTTCTATCAA TATCGTGGAA GTTGTAGTTT TACAATAAAG
3551 TTCCCACAAA AAGAAATATC AGATTAAGAG AAAATGTATG CTTTTCTGTT
3601 CAACTCTATA TCTCGTGGAA AAACAGAACA CAAACAAATC ATATACAGGA
3651 TGATTACAGC TTGACCCTGA GTGGGCATAA TGTGTTGTCT TTTAGATGGG
3701 AGCTGTAGGG CCCGTGTACA CTAGGCCTAT GATTGGTAGT GCACACACAA
3751 TGACCCAGAA CACTTAGCGT GGAAGAGTTA ATGCCGGTGT TTCTGGTTCA
3801 CATATACCAA GCACGCTTGT TAACAGGTTC TCTCTGGCTT GCTATATCTG
3851 CAGTGATTGC TTTCGCTTAA TATCAGACAT TCTTGGTTTC AATAATACTA
3901 GAAATATGTA TAAAATATAA TAAGTATACG GATTTCATTG GATCTGATGC
3951 TTTGCATTGT TGGGTTTTAA AAGTAGAAGT ACCGGCCCTT AGACGACCCG
4001 AAAACAAAGT TATTGAGAAG TTGTGTTTAC TATTGTGGTG CTTTCTCTAT
4051 TCTCGGTACC CAGGTATGGA ATCTGCCGGT ATCCACGAAA CTACCTACAA
4101 CAGCATCATG AAGTGCGACA TTGATATCCG TAAGGATCTG TACGCCAACA
4151 CCGTCCTCTC CGGAGGTACC AGCATGTACC CAGGTATCGC TGACCGTATG
4201 CAGAAGGAAA TCCAGGCCCT CGCTCCACCC ACGATGAAGA TCAAGATCAT
4251 CGCTCCCCCA GAGAGAAAGT ACTCCGTATG GATCGGTGGC TCCATCCTTG
4301 CCTCTCTGTC CACCTTCCAA CAGATGTGGA TCAGCAAGCA GGAATACGAC
4351 GAGTCTGGCC CCAGCATCGT CCACCGCAAA TGCTTCTAAA CTGTTTGCTG
4401 GAAATATTCA GACTGTATTT TTTTTTCAAT TATTGTGCAT TTTATTGTGC
4451 ATTTTTTTTG TTTCATCACC AGCGTTGACA TGGAAACCGA ATGAGTTCAC
4501 CATGGATTAT TATTAATATT ATTTATTTGT TCTCAGATTC TACTAATTTC
4551 AAAACAGTGC AATTGTGGTC AAACTGAATG AAGTTGTCAC AGCAGGCCAA
4601 CCATGTGCAA AAGAAGAAAA AAAAAAAAAA CTACGATACT CTCAGCCTTG
4651 AGTCATTCAA ACTGAAATTA TTCCCTTTTT TGGAGTCGCC GTTTTTATTT
4701 AGGTCTTTGT TTTGCAAAAA AGTAAGAACT GGCTTCGGTC TAATGAGAGA
4751 AGTTAATTCA CTGATTGTCT TGAGTGCCTT TGATGGATTG GCCGTAAAAA
4801 ATCTTGAAGT AAGACCAAGC GAGCAAACTA AGATGACTTT TTTTCCCCCT
4851 TTGCTGNACC AAATAAAACA GCTTCAACAG CAACAACAAA ATCTCGAAAA
4901 AAACCAAACT AGAAAAAATA AAAGGTAGAG CTAGATTTAT GATAGAAATA
4951 GAGACATTGT AAAAGCGAAA GTTGAATGGG CTGATCGATC TATATTGTTC
5001 AAATCAGATA CATTTTTATT CTGGTCCGTG CGACTTACGA TAGAGGGCGG
5051 GACACAAGTT GCAATATCAT